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dc.contributor.advisorDr. Imran Parvez
dc.contributor.authorHOSSAIN, MD. ARAFATH
dc.date.accessioned2022-04-24T07:04:14Z
dc.date.available2022-04-24T07:04:14Z
dc.date.issued2017-06
dc.identifier.urihttp://localhost:8080/xmlui/handle/123456789/778
dc.descriptionIn this world, 100 million people entirely depend on fish and fisheries for food and nutrition, income and livelihoods. Due to enormous growth of aquaculture, the world per capita fish supply increased up to 20kg (FAO, 2016). Within the production cyprinidae family plays significant role due to worldwide diversification and culture performances. Cyprinids are highly important as food fish; they are fished and farmed across Eurasia. Without the fast-flowing rivers majority in the land lock countries, cyprinidae is main species used for consumption due to covering the largest part of the fish biodiversity (Eschmeyer and Fong, 2015) and also used for drying and salting. Besides this to use as food fishes, in many areas including Bangladesh, cyprinidae fishes used as recreational fishing for centuries deliberately stocked in ponds and lakes (Kottelat, 2013). Several species of cyprinids have been introduced outside of their native habitat to provide food, sport or biological control for some pest species (Steven et al. 2005).Other than food fishes, there are significant number of popular aquarium cyprinids that include danionins, rasborines, and true barbs. Larger species are bred by the thousands in outdoor ponds, particularly in Southeast Asia and trade in these aquarium fishes is of considerable commercial importance. The small rasborines and danionines are perhaps only rivalled by characids and poecilid livebearers in their popularity for community aquaria (Riehl and Baensch, 1996).One particular species of these small and undemanding danionines is the zebra fish (Danio rerio). It has become the standard model species for studying developmental genetics of vertebrates, in particular fish (Helfman et al. 1997). Bangladesh is one of the richest countries of the world in respect of her vast and diverse inland water bodies in the form of rivers, flood plain, canals beels, haors, ponds, ox-bow lakes and coastal area. Fish and fisheries have been the integral part of the people of Bangladesh and play major role in employment generation providing nutritional security foreign exchange earnings and other aspect of the economy (DOF, 2016).en_US
dc.description.abstractAmblypharyngodon mola, locally known as “Mola” and Labeo bata, as “Bata” are fish of small indigenous species (SIS), belonging to subfamily Danioninae and Cyprininae, family Cyprinidae. Now a days both fishes are being considered as high aquaculture potential in Bangladesh. Hence, attempt was taken to reveal the evolutionary relationship of both species by using partial sequences of mitochondrial gene Cytochrome b (Cyt b). Sequences were amplified through PCR and submitted to the NCBI Genbank database after determined the final consensus size through multiple sequence alignment. The nucleotide sequences of related fishes were also retrieved from the NCBI genebank databases. The analyses were performed using computer software packages MEGA (Version 6.01). The length of consensus Cyt b were 357, 364 and 356 bp in A. mola, L. bata and A. testudineus respectively. The Transition/Transversion bias (R) was 0.91, where the rate of transitional substitution from A to G, T to C, C to T, G to A were 5.49, 24.93, 29.19 and 7.82 respectively. The rate of transversional substitution from A to T, A to C, T to A, T to G, C to A, C to G, G to T, G to C were 4.37, 4.37, 4.77,4.77, 3.07 and 3.07 respectively. The highest sequence divergence was found in between A. mola and a marine species Opsarius keta (10.003), and the lowest in between L. bata and a freshwater fishes of Australia Melanotaenia duboulayi (3.516). In Maximum likelihood method, studied taxa were grouped into three clades; clade 1consisted of Danio rerio, M. splendida, O. keta, Barilius bendelisis and L. carbasu; clade 2 formed by including O. bakeri, C. mrigala and L. gonius; clade 3 with M.dubolulayi, where A. mola did not form sister with any taxa. In Neighbour joining tree, three clades were also formed with similar cluster formation. Three clades were also observed in Maximum parsimony (MP) method. Interestingly in MP method A. mola formed clade 1 with B. bendelisis and L. bata. Same as previous two method D. rerio and O. keta formed sister group here. The time tree based on maximum likelihood method showed that there were the least times of divergence in between C. mrigala and L. gonius. There was the highest times of divergence (4.89 MYA) in between D. rerio and outgroup taxa A. testiduneus. The study concluded that A. mola and L. bata showed considerable variation in Cyt b gene sequences. A detailed phylogenetic and evolutionary analyses of entire fishes of the famiy Cyprinidae including more genes such as Cytochrome C Oxidase subunit-I, and nuclear genes are highly required to conserve the gene pools of these fishesen_US
dc.language.isoenen_US
dc.publisherHAJEE MOHAMMAD DANESH SCIENCE AND TECHNOLOGY UNIVERSITY, DINAJPURen_US
dc.subjectAmblypharyngodon molaen_US
dc.subjectLabeo bataen_US
dc.subjectPhylogenetic treeen_US
dc.titlePHYLOGENETIC RELATIONSHIP OF Amblypharyngodon mola (DANIONINAE) AND Labeo bata (CYPRININAE) BY CYTOCRHOME b GENE SEQUENCE ANALYSISen_US
dc.typeThesisen_US


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